Information for 10-GGMAMTYTGRCCT (Motif 28)

A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C C G T A C T A G C T G A A C G T A C G T A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.3 +/- 20.5bp
Average Position of motif in Background27.1 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGMAMTYTGRCCT
AGGNCANNGTGACCT
 A C G T A C G T A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGMAMTYTGRCCT-
GGTCANNGTGACCTN
 A C G T A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT---
TGGACTTTGNNCTNTG
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT--
TGGACTTTGNNCTCN
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT--
-------TGACCTYA
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT-
TGACCTTTGACCTC
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGMAMTYTGRCCT-
ATTGGACTTTGACCCC
 A C G T A C G T A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT-
------GTGACCTT
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT
-------TGACCT
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGMAMTYTGRCCT--
TGACCTCTGACCCCN
 A C T G A C T G G T C A C G T A T G C A A G C T G A T C A C G T A C T G C T A G A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T