Information for 16-SKYCTKTCCCAAGKKG (Motif 25)

A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
Reverse Opposite:
A G T C G T A C G T A C A G T C A C G T A G C T A C T G A C T G A C T G C G T A T G C A C G T A A C T G C T G A G T C A A T G C
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 17.7bp
Average Position of motif in Background48.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:SKYCTKTCCCAAGKKG
---HTTTCCCASG---
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:SKYCTKTCCCAAGKKG--
------TCCCNNGGGACN
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SKYCTKTCCCAAGKKG--
----ANTCCCTNGGGAAT
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:SKYCTKTCCCAAGKKG-
-----GTCCCCAGGGGA
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SKYCTKTCCCAAGKKG
----GGTGCCAAGT--
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SKYCTKTCCCAAGKKG
---CTGTTCCTGG---
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SKYCTKTCCCAAGKKG
-TKCTGTTCCA-----
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:SKYCTKTCCCAAGKKG--
---ATTTCCCAGVAKSCY
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-SKYCTKTCCCAAGKKG
KGCCCTTCCCCA-----
 A C G T A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:SKYCTKTCCCAAGKKG----
---NANTTTCAAGTGGTTAN
 A T C G A C G T A G C T A G T C A C G T A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T