Information for 7-GVGGVGTSCMCAG (Motif 21)

A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G A T C G G T C A G T A C A C T G A G T C A G T C A T C G A T G C
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.781
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif220.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets51.6 +/- 20.3bp
Average Position of motif in Background48.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GVGGVGTSCMCAG---
------TGCCCAGNHW
 A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GVGGVGTSCMCAG
GGGGGAATCCCC--
 A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GVGGVGTSCMCAG-
--------CACAGN
 A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GVGGVGTSCMCAG
AGGGGAATCCCCT-
 A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GVGGVGTSCMCAG
AGGGGAATCCCCT-
 A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GVGGVGTSCMCAG
NTNTGGGGGGTCNNNA-
 A C G T A C G T A C G T A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GVGGVGTSCMCAG----
-GGGTGTGCCCAAAAGG
 A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GVGGVGTSCMCAG-
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GVGGVGTSCMCAG
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GVGGVGTSCMCAG
CAAAGGCGTGGCCAG
 A C G T A C G T A T C G T A G C A C T G A C T G T G A C C A T G C A G T A T G C G T A C G T A C A G T C C G T A A C T G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G