Information for 2-CTGGGCCAAK (Motif 17)

G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
Reverse Opposite:
G T A C C A G T G C A T A C T G A C T G A T G C A G T C A G T C C G T A C T A G
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.719
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif475.7
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets49.1 +/- 23.7bp
Average Position of motif in Background50.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCCAAK
WDNCTGGGCA---
 A C G T A C G T A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCCAAK--
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGGGCCAAK
TTGGCA----
 G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCCAAK---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGGGCCAAK---
---AGCCAATCGG
 G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCCAAK
NTTGGCANN--
 A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGGGCCAAK---
AAATGGACCAATCAG
 A C G T A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCCAAK--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCAAK
CTAGGCCT--
 G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGGCCAAK
CCAGGAACAG-
 A C G T G A T C C G A T A C T G A C T G A T C G T G A C G T A C C G T A G T C A C A T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T