Information for 13-GCAGCWGCTCWTTTCA (Motif 16)

A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
Reverse Opposite:
C A G T A T C G G C T A C G T A G C T A C G A T A T C G G T C A C A T G G T A C C G T A T A C G G T A C G C A T C T A G A T G C
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.649
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif58.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets57.7 +/- 24.8bp
Average Position of motif in Background54.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCWGCTCWTTTCA
CGCAGCTGCG-------
 A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCWGCTCWTTTCA
AGCAGCTGCT-------
 A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGCWGCTCWTTTCA
CTCAGCAGCTGCTACTG---
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAGCWGCTCWTTTCA
AGCAGCTGCTNN-----
 A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCAGCWGCTCWTTTCA
ADGGYAGYAGCATCT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAGCWGCTCWTTTCA
NCAGCTGCTG------
 A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCWGCTCWTTTCA
SDGCAGGTGCNS------
 A C G T A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCAGCWGCTCWTTTCA
GCAGCTGTNN------
 A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCAGCWGCTCWTTTCA
GACAGCTGCAG------
 A C G T A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCAGCWGCTCWTTTCA
-CAGCTGNT-------
 A T C G A G T C C G T A C A T G A T G C G C A T A C T G G A T C A C G T A T G C G C T A C G A T G C A T C A G T A T G C G T C A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T