Information for 13-KAKCTGCACMACC (Motif 22)

A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C T G A C G T A C T G A G T C C G T A C T A G T G A C A C G T T G A C
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 16.8bp
Average Position of motif in Background60.0 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--KAKCTGCACMACC--
CAGATGTGCACATACGT
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KAKCTGCACMACC
--ATTGCACAATA
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KAKCTGCACMACC--
TGCCTGCGYCMCCTT
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---KAKCTGCACMACC-
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KAKCTGCACMACC
-AGATGCAATCCC
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:KAKCTGCACMACC----
-----GGACCACCCACG
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:KAKCTGCACMACC
---TTGCAACATN
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KAKCTGCACMACC----
-AGCGGCACACACGCAA
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:KAKCTGCACMACC
-ATTTGCATAA--
 A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---KAKCTGCACMACC
NNACAGCTGC------
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A G T C C G T A A G T C G T C A C G T A A G T C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T