Information for 5-GTTAATATTT (Motif 2)

C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T
Reverse Opposite:
G T C A C G T A C G T A A C G T G T C A A G C T A C G T C G T A C T G A G T A C
p-value:1e-17
log p-value:-4.053e+01
Information Content per bp:1.759
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif6.03%
Number of Background Sequences with motif515.8
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets58.4 +/- 22.3bp
Average Position of motif in Background49.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GTTAATATTT-----
-CTAATATTGCTAAA
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GTTAATATTT-----
-CTAATATTGCTAAA
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTTAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTTAATATTT----
-TTAATGTTTAACC
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATATTT----
NGTTAATNATTAACN
 A C G T C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTAATATTT--
GTTAATNATTAA
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTTAATATTT---
GTTAATGATTAAC
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T A C G T A C G T A C G T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTTAATATTT
---AATAATT
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTTAATATTT
TATGTAAATAT--
 A C G T A C G T A C G T C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTAATATTT
ATGAATATTC
 C A T G G A C T G C A T G T C A C T G A A C G T G T C A A C G T A C G T C A G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C