p-value: | 1e-9 |
log p-value: | -2.245e+01 |
Information Content per bp: | 1.668 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.87% |
Number of Background Sequences with motif | 214.0 |
Percentage of Background Sequences with motif | 0.46% |
Average Position of motif in Targets | 35.8 +/- 22.8bp |
Average Position of motif in Background | 50.0 +/- 26.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC ---NCCATTGTTC |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAACCCATTCTTC--- ANNTCCATTGTTCNNN |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAACCCATTCTTC---- ANNTCTATTGTTCNNNA |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC- ----CCATTGTTYB |
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SOX9/MA0077.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC ----CCATTGTTC |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC----- -AATCAATTGTTCCGCTA |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAACCCATTCTTC ---NCCATTGTTY |
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TEAD1/MA0090.2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC ---CACATTCCAT |
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TEAD4/MA0809.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAACCCATTCTTC ---CACATTCCAT |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAACCCATTCTTC------ TNNANNTCTATTGTTNTNNANN |
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