Information for 5-GGGGAATGGCTGT (Motif 13)

A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A C T G G T A C A G T C C G T A C G A T A C G T A G T C G T A C A T G C A G T C
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 22.3bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGGAATGGCTGT-
--TGATTGGCTANN
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGGAATGGCTGT
-CCGATTGGCT--
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGGAATGGCTGT
-GGGAATTGTAGT
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGGAATGGCTGT
-BTGABTGACAGS
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATGGCTGT
TGGGGAAGGGCM--
 A C G T A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGGAATGGCTGT-
AGGGGGATTAGCTGCC
 A C G T A C G T A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGGGAATGGCTGT-
---TAATGGCGGNC
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGGGAATGGCTGT
-----TTGGCA--
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGGAATGGCTGT
-NTGATTGACAGN
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGGAATGGCTGT---
-CTGATTGGTCNATTT
 A C T G A T C G A C T G A C T G C G T A C G T A A C G T A C T G A C T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T