Information for 10-GTTCAAACAA (Motif 28)

A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A C G T A C G T A C G T A C T G C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.6 +/- 27.7bp
Average Position of motif in Background68.7 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTCAAACAA
NATTCAAAT--
 A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTTCAAACAA
CGGTTTCAAA---
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAAACAA--
AGNGTTCTAATGANN
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTTCAAACAA-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTCAAACAA----
ATATCAAAACAAAACA
 A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTTCAAACAA-
--GTAAACAAT
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTTCAAACAA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTTCAAACAA-
----NAACAAT
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTTCAAACAA-
-----AACAAT
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTTCAAACAA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A C T G A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A