Information for 1-MWRWGTAAACAND (Motif 1)

G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
Reverse Opposite:
G T A C G C A T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A T G
p-value:1e-362
log p-value:-8.355e+02
Information Content per bp:1.653
Number of Target Sequences with motif335.0
Percentage of Target Sequences with motif49.19%
Number of Background Sequences with motif962.2
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets49.9 +/- 20.8bp
Average Position of motif in Background50.3 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-MWRWGTAAACAND-
NCWRWGTAAACANSV
 A C G T G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:MWRWGTAAACAND--
CAAAGTAAACANNNN
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-MWRWGTAAACAND
NCTAAGTAAACA--
 A C G T G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:MWRWGTAAACAND
-TATGTAAACANG
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:MWRWGTAAACAND
-AAAGTAAACA--
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:MWRWGTAAACAND
-AAAGTAAACA--
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:MWRWGTAAACAND
-WAAGTAAAYA--
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.94
Offset:1
Orientation:forward strand
Alignment:MWRWGTAAACAND
-TATGTAAATAT-
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:forward strand
Alignment:MWRWGTAAACAND
-TAAGTAAACAAA
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.93
Offset:1
Orientation:forward strand
Alignment:MWRWGTAAACAND
-TATGTAAATAT-
 G T A C C G A T T C G A C G A T A C T G A G C T G T C A G T C A C G T A A G T C C G T A C G T A C A T G
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T