Information for 5-GAGAVAGCAGAGABAA (Motif 4)

A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T T C G A A C G T A G T C C G A T T A G C A G C T T A C G A G T C A C G T A C T G A C G T A G T C A C G T A T G C
p-value:1e-15
log p-value:-3.610e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 19.3bp
Average Position of motif in Background44.0 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata4/MA0482.1/Jaspar

Match Rank:1
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GAGAVAGCAGAGABAA--
-------NNGAGATAAGA
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGAVAGCAGAGABAA
GGAGAAAGGTGCGA---
 A C G T A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GAGAVAGCAGAGABAA---
--------ANAGATAAGAA
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GAGAVAGCAGAGABAA------
--------NCAGATAAGAANNN
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GAGAVAGCAGAGABAA---
---------NAGATAAGNN
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GAGAVAGCAGAGABAA--
--------NBWGATAAGR
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.51
Offset:10
Orientation:forward strand
Alignment:GAGAVAGCAGAGABAA--
----------AGATAASR
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GAGAVAGCAGAGABAA
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GAGAVAGCAGAGABAA---
---------CAGATAAGGN
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GAGAVAGCAGAGABAA--
--------NVAGATAAGR
 A T C G C G T A A C T G C G T A T G A C C G T A A C T G A T G C C T G A A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A