Information for 7-GGGAGTAAGT (Motif 39)

A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G A T G T C A G T A C C A G T A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.333e+01
Information Content per bp:1.847
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif234.3
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets43.5 +/- 23.1bp
Average Position of motif in Background51.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GGGAGTAAGT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGTAAGT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGGAGTAAGT-
-AGAGGAAGTG
 A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGAGTAAGT---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGTAAGT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGGAGTAAGT-
-AGCGGAAGTG
 A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGAGTAAGT---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGGAGTAAGT---
----TTAAGTGGN
 A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGTAAGT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGGAGTAAGT---
----TTAAGTGGT
 A C T G C T A G A C T G G T C A A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T