Information for 6-RTYCACCWAG (Motif 38)

C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
Reverse Opposite:
A T G C C G A T C G A T C T A G A T C G C G A T A C T G C T G A C G T A G A T C
p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.719
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif604.5
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets56.6 +/- 25.8bp
Average Position of motif in Background48.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RTYCACCWAG
ATCCAC----
 C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RTYCACCWAG-
GGACCACCCACG
 A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RTYCACCWAG
GCGACCACCGAA
 A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RTYCACCWAG
GCGACCACCGAA
 A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---RTYCACCWAG
GGCGACCACCGA-
 A C G T A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RTYCACCWAG
CNGTCCTCCC--
 A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----RTYCACCWAG--
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RTYCACCWAG----
GAGTTCATTGAGTTCA
 A C G T A C G T C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RTYCACCWAG-
-ACCACCTGTT
 C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G A C G T
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RTYCACCWAG-----
-TTGACCTANTTATN
 C T A G C G A T G A C T G T A C C G T A T A G C A G T C G C T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A