Information for 17-CARCCWGCASWGKGSA (Motif 23)

A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
Reverse Opposite:
A C G T T A G C A G T C G T A C A G T C C G A T A T C G A C G T A C T G A G T C C G A T A C T G A C T G A G T C C G A T A C T G
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 18.3bp
Average Position of motif in Background61.7 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CARCCWGCASWGKGSA------
--GCCASCAGGGGGCGCYVNNG
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CARCCWGCASWGKGSA---
TGGCCACCAGGGGGCGCTA
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CARCCWGCASWGKGSA----
TGGCCACCAGGTGGCACTNT
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CARCCWGCASWGKGSA
CCCCCTGCTGTG----
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CARCCWGCASWGKGSA
GGCCYCCTGCTGDGH---
 A C G T A C G T A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CARCCWGCASWGKGSA-
NNNANTGCAGTGCNNTT
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CARCCWGCASWGKGSA
TCGTACCCGCATCATT--
 A C G T A C G T A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CARCCWGCASWGKGSA
TGAGTCAGCA-------
 A C G T A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CARCCWGCASWGKGSA
-TACCCGCATN-----
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CARCCWGCASWGKGSA
---CCTGCTGAGH---
 A G T C C G T A C T A G A G T C A G T C C G T A A C T G A G T C C G T A A T G C C G T A A C T G C A G T A C T G A T C G C G T A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T