Information for 14-CWGGACACAGGATGGR (Motif 19)

A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
Reverse Opposite:
A G C T G T A C A G T C G C T A A C G T G A T C A G T C A C G T C T A G C G A T A C T G A G C T T A G C G T A C C G T A A C T G
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.678
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif42.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.5 +/- 27.0bp
Average Position of motif in Background59.0 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CWGGACACAGGATGGR
CGAAGCACACAAAATA--
 A C G T A C G T A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CWGGACACAGGATGGR
-TGTAAACAGGA----
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CWGGACACAGGATGGR-
--GAGCACAGCAGGACA
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CWGGACACAGGATGGR
-----AACAGGAAGT-
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CWGGACACAGGATGGR
NNNVCTGWGYAAACASN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CWGGACACAGGATGGR
--GTAAACAG------
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CWGGACACAGGATGGR-
--CCACACAGCAGGAGA
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CWGGACACAGGATGGR
-----CACAGN-----
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CWGGACACAGGATGGR
----DCTCAGCAGG--
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CWGGACACAGGATGGR-
--CCACACAGCAGGAGA
 A G T C C G A T A C T G A T C G C T G A T G A C G C T A A G T C C G T A C T A G C T A G T G C A C G A T C T A G C A T G T C G A A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A