Information for 11-CTGTTTGTCCAGACAG (Motif 15)

A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G C A G T G T A C C G A T C T A G A C T G C G T A A G T C G T C A C G T A G C T A G A T C C G T A C T A G
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.786
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 26.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTGTTTGTCCAGACAG
-----CGTCTAGACA-
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGTTTGTCCAGACAG
----TTTTCCA-----
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGTTTGTCCAGACAG----
---CAAATCCAGACATCACA
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CTGTTTGTCCAGACAG
--------CCAGACAG
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTGTTTGTCCAGACAG
-----TGCCCAGNHW-
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTTGTCCAGACAG
CNNNTATTGTTCNNNNN-
 A C G T A C G T A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGTTTGTCCAGACAG
CTCATTGTC-------
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGTTTGTCCAGACAG
AATCAATTGTTCCGCTA-
 A C G T A C G T A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGTTTGTCCAGACAG
-YCTTTGTTCC-----
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CTGTTTGTCCAGACAG--
--------CCAGACRSVB
 A G T C A C G T C T A G C A G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C