Information for 11-TKCACCCTGSACTTTK (Motif 20)

A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
Reverse Opposite:
T G A C C G T A C G T A C T G A A C T G A C G T T A C G G T A C G C T A A C T G A C T G A C T G A C G T A T C G G T A C C G T A
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets68.4 +/- 25.4bp
Average Position of motif in Background48.6 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TKCACCCTGSACTTTK
GTTGACCTTTGACCTTT
 A C G T A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK
TGGACTTTGNNCTNTG
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK---
---NNATTGGACTTTNGNN
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK------
-------TGGACTTTGNNCTCN
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK---
----CCTTGCAATTTTTNN
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TKCACCCTGSACTTTK
TTTGCACACGGCAC----
 A C G T A C G T A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK--
--AACACTGCACATTGTT
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TKCACCCTGSACTTTK
TTCACGCATGAGTT--
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK-----
-----ATTGGACTTTGACCCC
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TKCACCCTGSACTTTK
------CTGACCTTTG
 A C G T A C T G A T G C C G T A G T A C G T A C T G A C C G A T A C T G A T G C G T C A G T A C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G