Information for 4-GTWAATATTTRTC (Motif 2)

A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
Reverse Opposite:
A C T G C G T A G A T C G T C A G T C A C G T A A G C T C G T A A G C T C G A T C G T A C T G A G T A C
p-value:1e-49
log p-value:-1.137e+02
Information Content per bp:1.715
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif126.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets52.2 +/- 23.9bp
Average Position of motif in Background49.6 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTWAATATTTRTC
GTTAATGATTAAC
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTWAATATTTRTC-
NGTTAATNATTAACN
 A C G T A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GTWAATATTTRTC
GTTAATNATTAA-
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTWAATATTTRTC-
-TTAATGTTTAACC
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GTWAATATTTRTC
---AATAATT---
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTWAATATTTRTC--
-CTAATATTGCTAAA
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTWAATATTTRTC--
-CTAATATTGCTAAA
 A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTWAATATTTRTC
TATGTAAATAT-----
 A C G T A C G T A C G T A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTWAATATTTRTC
TATGTAAATAT-----
 A C G T A C G T A C G T A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTWAATATTTRTC--
AGTAATTAATTACTTC
 A C G T A C T G A G C T G C A T G C T A C T G A A C G T C T G A C G A T A C G T A C G T C T A G G C A T G T A C A C G T A C G T
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C