Information for 8-CRRAGKSRGMKGCTYT (Motif 15)

A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A A C T G A G T C G T A C A C T G A G T C A G C T A T C G G T C A A G T C A C G T A G T C A G C T A C T G
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.6 +/- 15.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
----------NGCTN-
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
----AGCAGCTGCT--
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CRRAGKSRGMKGCTYT
----AGCAGCTGCTNN
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
------CAGCTGNT--
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
-NGNGACAGCTGCN--
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
-GGCGGGGGCGGGGG-
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CRRAGKSRGMKGCTYT
----CGCAGCTGCG--
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.46
Offset:5
Orientation:forward strand
Alignment:CRRAGKSRGMKGCTYT
-----NCAGCTGCTG-
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CRRAGKSRGMKGCTYT
--NNVVCAGCTGBN--
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CRRAGKSRGMKGCTYT
-ATTGCCTCAGGCAAT
 A G T C C T G A C T A G C G T A A C T G A C G T T A G C C T G A A C T G G T A C A C T G A C T G A G T C A C G T A G C T A G C T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T