Information for 15-ACACYGAGTGGCA (Motif 10)

C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A G T C C G T A A G T C A G C T G T A C C T G A A C T G C A G T A C T G A C G T
p-value:1e-13
log p-value:-3.143e+01
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 16.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACACYGAGTGGCA--
---BTGABTGACAGS
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACACYGAGTGGCA----
-TGCGGAGTGGGACTGG
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACACYGAGTGGCA--
---NTGATTGACAGN
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACACYGAGTGGCA-
-----GGTTGGCAT
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACYGAGTGGCA
--CTTGAGTGGCT
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACACYGAGTGGCA----
-NGTAGGTTGGCATNNN
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACACYGAGTGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACACYGAGTGGCA
---TTRAGTGSYK
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACACYGAGTGGCA---
----TGAGTGACAGSC
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACACYGAGTGGCA
---TTGAGTGSTT
 C G T A A G T C G C T A A G T C A G C T A C T G C T G A A C T G C G A T A C T G A C T G A G T C C G T A
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T