Information for 8-GCTGCTAMAGCTA (Motif 5)

A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
Reverse Opposite:
A C G T C G T A C T A G T A G C A C G T A C G T C G A T C G T A A C T G A G T C C G T A A C T G A G T C
p-value:1e-16
log p-value:-3.734e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 29.2bp
Average Position of motif in Background47.7 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTAMAGCTA
AGCAGCTGCT-------
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTAMAGCTA
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GCTGCTAMAGCTA
CTCAGCAGCTGCTACTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTAMAGCTA
AGCAGCTGCTNN-----
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTAMAGCTA
CAGCTGNT-------
 A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTAMAGCTA
ACATGCTACCTAATAC-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGCTAMAGCTA
GRTGMTRGAGCC-
 A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTGCTAMAGCTA
NCAGCTGCTG------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCTAMAGCTA
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCTAMAGCTA
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A G T C A C G T A A T C G A G T C C G A T G T C A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T