Information for 18-GGCTGGGCTA (Motif 39)

A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A G T C A G T C C G T A A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets64.8 +/- 28.9bp
Average Position of motif in Background45.6 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGCTGGGCTA
WDNCTGGGCA-
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGGGCTA
GGGGGCGGGGCC-
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCTGGGCTA
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGCTGGGCTA-
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCTGGGCTA--
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GGCTGGGCTA
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTGGGCTA
NGCTN-----
 A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGGCTA
TWGTCTGV----
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCTGGGCTA-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGGGCTA-
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T C G T A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G