Information for 22-CCHGCTGCDGCTTTTT (Motif 37)

A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G T A C G T A T C A G A G T C G A T C T A C G A G T C C G T A A C T G A G T C C A T G A C T G A T C G
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.774
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 23.5bp
Average Position of motif in Background33.4 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
--AGCAGCTGCT----
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
NNAGCAGCTGCT----
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
--TACTTCCGCTTTTT
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCHGCTGCDGCTTTTT
CTCAGCAGCTGCTACTG---
 A C G T A C G T A C G T A C G T A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCHGCTGCDGCTTTTT
NCAGCTGCTG------
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
----CAGCTGNT----
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
-NNGCAGCTGTT----
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
-NNGCAGCTGTC----
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCHGCTGCDGCTTTTT
---GCAGCTGTNN---
 A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCHGCTGCDGCTTTTT
NVCAGCTGBBNN-----
 A C G T A T G C A G T C G A T C T C A G A G T C G C A T A C T G A T G C C A T G A C T G A G T C A C G T A C G T A C G T C G A T C G A T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T