Information for 9-CGTGTGGCAGGGA (Motif 13)

A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A C T G G T A C A G T C C G T A A G T C C G T A A T G C T A C G
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.8 +/- 23.3bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGTGTGGCAGGGA
-GTGGGGGAGGGG
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTGGCAGGGA---
NAGANTGGCGGGGNGNA
 A C G T A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTGGCAGGGA
TGGGTGTGGC-----
 A C G T A C G T A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGTGTGGCAGGGA
---TTGCCAAG--
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGTGTGGCAGGGA---
----TGTCAGGGGGCG
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTGTGGCAGGGA
NGCGTGGGCGGR-
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGTGTGGCAGGGA
GGGGCTYGKCTGGGA
 A C G T A C G T A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGTGTGGCAGGGA
NTGGGTGTGGCC----
 A C G T A C G T A C G T A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTGTGGCAGGGA-
--TTTGGCGGGAAA
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A A C G T
A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGTGTGGCAGGGA
---TTGACAGC--
 A G T C A T C G A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G C G T A
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T