Information for 2-ATGCTGCTGGCCG (Motif 4)

G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
Reverse Opposite:
A G T C C T A G A C T G A G T C A G T C C G T A A T C G A T G C C G T A A T C G A G T C C G T A A C G T
p-value:1e-12
log p-value:-2.872e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 23.6bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTGCTGGCCG
AGATGCTRCTRCCHT
 A C G T A C G T G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ATGCTGCTGGCCG
------TTGGCA-
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG
-NVCAGCTGBBNN
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATGCTGCTGGCCG
--VCAGCTGBNN-
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG
CAGCAGCTGN---
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG
--GCAGCTGTNN-
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG-
-----NTTGGCANN
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG
NNGCAGCTGTC--
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGCTGCTGGCCG
NNGCAGCTGTT--
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGCTGCTGGCCG-
-TGCAGCTGTCCCT
 G T C A A C G T A C T G A T G C C G A T A T C G A T G C A C G T A C T G A C T G A G T C A G T C C T A G A C G T
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T