Information for 8-CSAATTAATT (Motif 12)

G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A C G T A C G A T A C G T A T G C C A T G
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.9 +/- 24.5bp
Average Position of motif in Background43.4 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0149.1_Pou3f4/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CSAATTAATT-----
AATTAATTAATTAATTC
 A C G T A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CSAATTAATT-
GATTAATTAATTT
 A C G T A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PH0142.1_Pou1f1/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CSAATTAATT-----
GATTAATTAATTAAGTC
 A C G T A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0146.1_Pou3f1/Jaspar

Match Rank:4
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CSAATTAATT-----
AATTAATTAATTAATTC
 A C G T A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CSAATTAATT------
GAAAATTAATTACTTCG
 A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0147.1_Pou3f2/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CSAATTAATT------
GATAATTAATTAGTTTG
 A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0120.1_Nkx6-3/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CSAATTAATT------
GAAAATTAATTACTTTG
 A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0136.1_Phox2b/Jaspar

Match Rank:8
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CSAATTAATT------
CGGAATTAATTAATAGG
 A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G

PH0132.1_Pax6/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CSAATTAATT-----
GNNAATTAATTAATCA
 A C G T G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CSAATTAATT--
-ATATTAATTAA
 G T A C T A C G C G T A C G T A A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A