Information for 5-CCAAAGAGGAATCCAN (Motif 6)

A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
Reverse Opposite:
A C G T A G C T C T A G A C T G C T G A A C G T A G C T A T G C G T A C A C G T A G T C A G C T A C G T C G A T A T C G A T C G
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.740
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 32.3bp
Average Position of motif in Background58.4 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
----AGAGGAA-----
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN-
----AGGGGAATCCCCT
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
--AAAGRGGAAGTG--
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCAAAGAGGAATCCAN-
----AGGGGAATCCCCT
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
----CCWGGAATGY--
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A C G T A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
----GGGGGAATCCCC
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
-TTAAGAGGAAGTTA-
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCAAAGAGGAATCCAN---
-------SSAATCCACANN
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN
-GAGAACCGAAACTG-
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCAAAGAGGAATCCAN--
GGAAAGCGAAACCAAAAC
 A T G C A T G C G C T A G T C A C T G A C T A G T C G A A C T G A T C G C T G A C G T A A G C T A G T C A G T C C T G A C G T A A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C