p-value: | 1e-12 |
log p-value: | -2.943e+01 |
Information Content per bp: | 1.786 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 1.07% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 57.3 +/- 13.9bp |
Average Position of motif in Background | 59.2 +/- 42.0bp |
Strand Bias (log2 ratio + to - strand density) | -2.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC -GAATATTCAT----- |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAAGATTCATABTTC ATGAATATTCATGAG-- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC -GHATATKCAT----- |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGAAGATTCATABTTC- -----ATGCATAATTCA |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC--- ---ANNTCCATTGTTCNNN |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC NGAAGC---------- |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | AGAAGATTCATABTTC- -------YCTTTGTTCC |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC------ TNNANNTCTATTGTTNTNNANN |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGAAGATTCATABTTC---- ---NNNTCCTTTGTTCTNNN |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGAAGATTCATABTTC---- ---GTATCTATTGTTCTTTA |
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