Information for 1-TGKCCTTGTGCAGAAT (Motif 1)

A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
Reverse Opposite:
C T G A A G C T C G A T A T G C C A G T C T A G G A T C T C G A A G T C G T C A C G T A A T C G A C T G G T A C A G T C C G T A
p-value:1e-17
log p-value:-4.003e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 15.1bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGKCCTTGTGCAGAAT
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGKCCTTGTGCAGAAT
TGACCTTGAN------
 A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGKCCTTGTGCAGAAT
TGACCTTGAV------
 A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGKCCTTGTGCAGAAT
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGKCCTTGTGCAGAAT
GTGACCTT---------
 A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGKCCTTGTGCAGAAT
NTGACCTTGA-------
 A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGKCCTTGTGCAGAAT
TGACCTYA--------
 A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGKCCTTGTGCAGAAT
ATGACCTTGA-------
 A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGKCCTTGTGCAGAAT
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGKCCTTGTGCAGAAT
NATGACCTTGA-------
 A C G T A C G T A C G T A C T G A C T G A G T C T A G C A C G T A C G T C T A G A G C T C T A G A G T C G C T A T A C G C G T A C T G A A G C T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T