Information for 2-CCATAKCCTGGCA (Motif 5)

A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
Reverse Opposite:
C A G T A T C G A T G C G T A C C G T A C T A G C T A G G T C A C G A T C G T A C G A T A C T G A T C G
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.763
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 31.1bp
Average Position of motif in Background42.9 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCATAKCCTGGCA
AAGATATCCTT---
 A C G T A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CCATAKCCTGGCA-
------CTTGGCAA
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCATAKCCTGGCA
--ATTTCCTGTN-
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCATAKCCTGGCA--
------NTTGGCANN
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCATAKCCTGGCA
ACCACATCCTGT--
 A C G T A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CCATAKCCTGGCA
-------TTGGCA
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCATAKCCTGGCA
NNAYTTCCTGHN-
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCATAKCCTGGCA
-BNTGDCCTTG--
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCATAKCCTGGCA--
-----NNTTGGCANN
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCATAKCCTGGCA
--ACATCCTGNT-
 A T G C G T A C C G T A A C G T G C T A A C G T A G T C A G T C A C G T A C T G A T C G A T G C G T C A
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T