Information for 23-ACARCTCCAGAAATWR (Motif 42)

C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
Reverse Opposite:
A G C T G C A T C G T A A C G T A C G T A C G T A G T C A G C T A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T
p-value:1e-1
log p-value:-4.132e+00
Information Content per bp:1.912
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ACARCTCCAGAAATWR-
-----KCCAAAAATAGC
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACARCTCCAGAAATWR--
-CAAATCCAGACATCACA
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACARCTCCAGAAATWR-
-----DCYAAAAATAGM
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACARCTCCAGAAATWR
------CCAAAAATAG
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACARCTCCAGAAATWR--
---ATGCTAAAAATAGAA
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ACARCTCCAGAAATWR
-------CACTAATT-
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACARCTCCAGAAATWR-
-----GCTAAAAATAGC
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACARCTCCAGAAATWR
------CCATATATGG
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ACARCTCCAGAAATWR
---ATGCCAGACN---
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACARCTCCAGAAATWR
--GGTTCCNNAATTTG
 C G T A A G T C C G T A C T A G A G T C A C G T A G T C A G T C C T G A A C T G C G T A C G T A C G T A A C G T C G A T C T G A
A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G