Information for 21-KGGGAYCKYGCTGKCC (Motif 39)

A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G G T C A G T A C C G T A A C T G A G T C C T G A G T C A A C T G C T G A A G C T A G T C A G T C A G T C T G A C
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.865
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 5.0bp
Average Position of motif in Background44.4 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC
-GGCCYCCTGCTGDGH
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KGGGAYCKYGCTGKCC-
--AGGNCANNGTGACCT
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:KGGGAYCKYGCTGKCC-
-NAGAACAGNCTGTNCT
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-KGGGAYCKYGCTGKCC
TGGGGA-----------
 A C G T A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC-
-NAGNACANNNTGTNCT
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC--
-GGGAACACGGTGTACCC
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-KGGGAYCKYGCTGKCC---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC
------CCTGCTGAGH
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC
---------GCTGTG-
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:KGGGAYCKYGCTGKCC
-VAGRACAKWCTGTYC
 A C G T A C T G A C T G A C T G C T G A A G C T A G T C A C G T A G C T A C T G A G T C A C G T A C T G A C G T A G T C A G T C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C