Information for 15-GGGAMTTGTAGTC (Motif 29)

A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A A T G C A C G T G T C A G T A C C T G A G C T A A C T G A G C T A G T C A T G C A G T C
p-value:1e-7
log p-value:-1.824e+01
Information Content per bp:1.803
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.7 +/- 31.6bp
Average Position of motif in Background42.5 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC
GGGAATTGTAGT-
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAMTTGTAGTC
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.76
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAMTTGTAGTC
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC---
GNNATTTGTCGTAANN
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC-----
-NNANTGGTGGTCTTNNN
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC--
---NNHTGTGGTTWN
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GGGAMTTGTAGTC--
-------TTAATCCG
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC--
-------YTAATCCY
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGGAMTTGTAGTC---
NCGTATTATAATCNTA
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GGGAMTTGTAGTC--
-------TTAATCCT
 A C T G A T C G C T A G C T G A T G A C C G A T A G C T A C T G A C G T C G T A A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T