Information for 11-GCGTTACGCACGC (Motif 9)

C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
Reverse Opposite:
A T C G A G T C A C T G A C G T A C T G A G T C A C T G A C G T G T C A C G T A A G T C C T A G A G T C
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 21.5bp
Average Position of motif in Background60.8 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCGTTACGCACGC--
-----TBGCACGCAA
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGTTACGCACGC
--ATGACGTA---
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGTTACGCACGC-----
-CGTCACGCATGACTGCA
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GCGTTACGCACGC-
--------CACGCA
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Gmeb1/MA0615.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTACGCACGC--
NNNTNGTACGTAANNNN
 A C G T A C G T C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTACGCACGC--
NNNTNGTACGTAANNNN
 A C G T A C G T C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCGTTACGCACGC
--ATTGCGCAAT-
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCGTTACGCACGC
--ATTGCGCAAT-
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
A C G T A C G T T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGTTACGCACGC
--ATTGCGCAAT-
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
A C G T A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCGTTACGCACGC
---TTACGTAA--
 C T A G A G T C A C T G A C G T C A G T C G T A A G T C A C T G A G T C C G T A T A G C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A A C G T A C G T