Information for 5-CTGAGYGCCCCCTGGT (Motif 7)

A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C C G T A A C T G T C A G C T A G C T A G C T A G G T A C C T A G G T A C A G C T T A G C T G C A A C T G
p-value:1e-15
log p-value:-3.493e+01
Information Content per bp:1.780
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 21.6bp
Average Position of motif in Background41.6 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTGAGYGCCCCCTGGT-----
--TAGCGCCCCCTGGTGGCCA
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGAGYGCCCCCTGGT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT-----
-ANAGTGCCACCTGGTGGCCA
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CTGAGYGCCCCCTGGT---
-------CCCCCTGCTGTG
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT
------ACCACCTGTT
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT
------GCCATCTGTT
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT
------NNCACCTGNN
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTGAGYGCCCCCTGGT-
-----CGCCCCCTGACA
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT----
-----GGCCYCCTGCTGDGH
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGAGYGCCCCCTGGT
------ACATCCTGNT
 A G T C A C G T A C T G C T G A A C T G A G T C C A T G A G T C A G T C G A T C A G T C A G T C A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T