Information for 8-GYCATCTYAGGCC (Motif 6)

A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
Reverse Opposite:
A T C G A C T G A G T C G T A C A G C T T C G A C G T A A C T G C T G A A C G T A C T G C T G A A G T C
p-value:1e-16
log p-value:-3.692e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 16.2bp
Average Position of motif in Background64.8 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GYCATCTYAGGCC-
GGTCANYTGAGGWCA
 A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GYCATCTYAGGCC
ACGTCATC-------
 A C G T A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GYCATCTYAGGCC
GTCATN-------
 A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GYCATCTYAGGCC
GCNGCCATCTTG----
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GYCATCTYAGGCC
GCCGCCATCTTG----
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GYCATCTYAGGCC
TGTCANYT------
 A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GYCATCTYAGGCC
GWAAYHTGAKMC-
 A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GYCATCTYAGGCC
TGACACCT------
 A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GYCATCTYAGGCC
GCCATCTGTT---
 A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GYCATCTYAGGCC
NTGTCAN--------
 A C G T A C G T A C T G A G C T A G T C C G T A A G C T A G T C C G A T A G C T C T G A A C T G C T A G A G T C T A G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T