Information for 3-CCCCCTGGTGGTTCTG (Motif 5)

G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
Reverse Opposite:
T G A C C T G A A C T G C T G A C G T A A G T C A G T C C G T A A T G C A G T C G T C A C T A G T A C G C T A G A T C G C A T G
p-value:1e-16
log p-value:-3.756e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.3 +/- 28.7bp
Average Position of motif in Background42.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCTGGTGGTTCTG
CNNBRGCGCCCCCTGSTGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCCTGGTGGTTCTG
TAGCGCCCCCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCCCCTGGTGGTTCTG
ANAGTGCCACCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGTTCTG
CCCCCCCGGGGGGGT---
 A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGTTCTG
CCCCCCCGGGGGGGT---
 A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCCCTGGTGGTTCTG--
-NNANTGGTGGTCTTNNN
 G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G A C G T A C G T
A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGTTCTG
CACCCCCGGGGGGG----
 A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCCTGGTGGTTCTG
CCCCCTGCTGTG----
 G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGGTGGTTCTG
GGCCYCCTGCTGDGH---
 A C G T A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCTGGTGGTTCTG
GCTTCGTGGGGGGTCT-
 A C G T G T A C A T G C G A T C A G T C A G T C C A G T C T A G A T C G C G A T A C T G C T A G C G A T A G C T A G T C A G C T A C T G
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T