Information for 13-CGYCACGTGR (Motif 19)

G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
Reverse Opposite:
G A C T A T G C C G T A T G A C A T C G A G C T T C A G C T G A A G T C C T A G
p-value:1e-4
log p-value:-1.107e+01
Information Content per bp:1.665
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif377.4
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets52.9 +/- 23.2bp
Average Position of motif in Background48.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:CGYCACGTGR
GGTCACGTGA
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:CGYCACGTGR
-GHCACGTG-
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:CGYCACGTGR
-GNCACGTG-
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.96
Offset:3
Orientation:forward strand
Alignment:CGYCACGTGR
---CACGTG-
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CGYCACGTGR
-NCCACGTG-
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CGYCACGTGR
-NVCACGTG-
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:CGYCACGTGR
--ACACGTGC
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CGYCACGTGR-
-GTCACGTGNT
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

MLXIPL/MA0664.1/Jaspar

Match Rank:9
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CGYCACGTGR-
-ATCACGTGAT
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A A C G T
A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:CGYCACGTGR
--TCACGTGC
 G A T C T C A G G A C T A G T C C T G A A T G C A C T G A C G T A T C G C T G A
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C