Information for 13-GACCCTGACCTGA (Motif 16)

A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
Reverse Opposite:
C A G T A G T C C T G A C T A G A C T G C A G T A G T C C T G A C A T G C T A G T C A G G A C T A T G C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.673
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 20.2bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGACCT--
 A C G T A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGACCT--
 A C G T A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACCTGA
-----TGACCTYA
 A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACCTGA
-----TGACCT--
 A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACCTGA
GCTGACCTTGAACTN-
 A C G T A C G T A C G T A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACCCTGACCTGA----
-NNNNTGACCCGGCGCG
 A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGAV----
 A C G T A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACCTGA
TGACCTTGAN----
 A C G T A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GACCCTGACCTGA----
-NNCNTGACCCCGCTCT
 A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACCTGA
-----TGACCYCT
 A T C G C T G A A G T C A G T C G A T C A G C T A C T G G T C A A G T C A G T C A G C T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T