Information for 12-AGMGGRGWCMCCC (Motif 12)

C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G A C T G A C T G C T A G C G T A A G T C A G C T A G T C A T G C A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 19.2bp
Average Position of motif in Background49.1 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGMGGRGWCMCCC
-GGGGATTCCCCC
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGMGGRGWCMCCC
AGGGGAATCCCCT
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGMGGRGWCMCCC------
--AGGAGACCCCCAATTTG
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGMGGRGWCMCCC
AGGGGATTCCCCT
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGMGGRGWCMCCC
---GGAAATCCCC
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGMGGRGWCMCCC-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGMGGRGWCMCCC---
NNNGGGGCGCCCCCNN
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGMGGRGWCMCCC-
----AAGACCCYYN
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGMGGRGWCMCCC-----
--TATCGACCCCCCACAG
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGMGGRGWCMCCC----
NNNNGGTACCCCCCANN
 C G T A A C T G G T A C A T C G A C T G C T G A A C T G C G A T A G T C G T A C A G T C A T G C A G T C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C