Information for 4-AGGGGAGATCTGATTC (Motif 9)

C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C
Reverse Opposite:
A C T G C G T A T C G A C G A T A G T C C G T A A C T G C G T A A G C T G A T C C G A T A G T C A T G C A T G C A G T C G C A T
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.708
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.2 +/- 28.3bp
Average Position of motif in Background53.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGGGGAGATCTGATTC
----GWAAYHTGABMC
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGGGGAGATCTGATTC
----GWAAYHTGAKMC
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGGGGAGATCTGATTC--
------CAGCTGTTTCCT
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGGGGAGATCTGATTC-
------GAAATGACTCA
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGGGAGATCTGATTC--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AGGGGAGATCTGATTC---
--------TGTGACTCATT
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGGGAGATCTGATTC-
CCNNACCATCTGGCCTN
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:9
Orientation:forward strand
Alignment:AGGGGAGATCTGATTC---
---------ATGACTCATC
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:AGGGGAGATCTGATTC-
----------TGAGTCA
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGGGAGATCTGATTC--
----AGGAGATGACTCAT
 C G T A A C T G A T C G T A C G C T A G C G T A C T A G C T G A G A C T G T A C A C G T C T A G G C T A A G C T C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T