Information for 9-GCACTTCAAGCCA (Motif 8)

T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G C T C G A T A C T G G T C A C G T A A C T G A C G T A C T G A G T C
p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 26.5bp
Average Position of motif in Background50.7 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCACTTCAAGCCA
CCACTTGAA----
 T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCACTTCAAGCCA
ACCACTTGAA----
 A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCACTTCAAGCCA
RSCACTYRAG----
 A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCACTTCAAGCCA
NSCACTYVAV----
 A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCACTTCAAGCCA
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCACTTCAAGCCA
AASCACTCAA-----
 A C G T A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCACTTCAAGCCA
MRSCACTYAA-----
 A C G T A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCACTTCAAGCCA
ACCACTTAA-----
 A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCACTTCAAGCCA
GCACTTAA-----
 T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCACTTCAAGCCA
AAGCACTTAA-----
 A C G T A C G T T C A G A G T C C G T A A G T C A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T