Information for 6-CCCTCTCTTGCTAGTT (Motif 21)

A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C T G
p-value:1e-1
log p-value:-4.100e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 27.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT
---TCTATTTATAGN-
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT--
---NCNTTTGTTATTTNN
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT
---GCTATTTATAGC-
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT---
----NTNTTGTTGTTTGTN
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTCTTGCTAGTT-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT
---TCTATTTTTAGA-
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CCCTCTCTTGCTAGTT---
---------ACTAGTTAAC
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CCCTCTCTTGCTAGTT-----
-----ACTTGCTACCTACACC
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT
----CTGTTGCTAGGS
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CCCTCTCTTGCTAGTT--
--------TGGCAGTTGN
 A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G