Information for 13-AMACGGAGCC (Motif 20)

C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
p-value:1e-4
log p-value:-9.821e+00
Information Content per bp:1.891
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets62.7 +/- 29.0bp
Average Position of motif in Background52.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AMACGGAGCC
---CGGAGC-
 C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AMACGGAGCC
--AGCGCGCC
 C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AMACGGAGCC
-----CAGCC
 C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AMACGGAGCC
---NGAAGC-
 C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AMACGGAGCC
GAGSCCGAGC-
 A C G T C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AMACGGAGCC------
AGCTCGGCGCCAAAAGC
 A C G T C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AMACGGAGCC------
CCTTCGGCGCCAAAAGG
 A C G T C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AMACGGAGCC------
AAAAATGGCGCCATTTTT
 A C G T A C G T C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AMACGGAGCC
ACACGTGGC-
 C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AMACGGAGCC--
ATAAACCGAAACCAA
 A C G T A C G T A C G T C G T A T G A C C G T A A G T C C T A G C T A G C G T A A C T G A G T C A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A