Information for 1-NNGGGRAWTYCCC (Motif 1)

G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
Reverse Opposite:
C A T G C A T G C A T G C T A G G T C A C G T A C A G T G A T C G T A C G T A C G A T C G A C T C A G T
p-value:1e-304
log p-value:-7.012e+02
Information Content per bp:1.578
Number of Target Sequences with motif387.0
Percentage of Target Sequences with motif48.86%
Number of Background Sequences with motif1978.1
Percentage of Background Sequences with motif4.17%
Average Position of motif in Targets52.2 +/- 17.9bp
Average Position of motif in Background51.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC-
-AGGGGAATCCCCT
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
-NGGGGATTTCCC
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC-
--GGGGATTCCCCC
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.90
Offset:2
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
--GGGGATTTCC-
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.89
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC-
-AGGGGAATCCCCT
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.86
Offset:2
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
--GGGAATTTCC-
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC
--GGGAATTTCC-
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.83
Offset:2
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
--GGGGATTTCC-
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC-
--------TCCCCA
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:NNGGGRAWTYCCC--------
----AAATTCCCCCCGGAAGT
 G T C A C T G A C T A G A C T G C A T G C T A G G T C A G C A T A C G T G A T C G T A C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T