Information for 7-AGAGGTCACC (Motif 8)

C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
Reverse Opposite:
C T A G T C A G A G C T A T C G T G C A T G A C G T A C C A G T A G T C G A C T
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.654
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif403.1
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets47.5 +/- 24.1bp
Average Position of motif in Background49.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTCACC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AGAGGTCACC
AGRGGTCA--
 C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTCACC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AGAGGTCACC
-AAGGTCAC-
 C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGAGGTCACC
TRAGGTCA--
 C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTCACC--
CAAAGGTCAAGGG
 A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTCACC---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTCACC
CAAAGGTCAG-
 A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGTCACC---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGTCACC
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C T G A C T A G G T C A C A T G A C T G A C G T T A G C T C G A A G T C G A T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T