Information for 8-GAGGCCTTAGAAGGGG (Motif 16)

C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A G C T A C G T A G T C A G C T C G T A C T G A A C T G A C T G A G T C A G T C A C G T A G T C
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 25.7bp
Average Position of motif in Background36.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGCCTTAGAAGGGG
-AGGCCTNG-------
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTTAGAAGGGG
CTAGGCCT---------
 A C G T C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGGCCTTAGAAGGGG
--TNCCATATATGG--
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGGCCTTAGAAGGGG
--GNCTATAAAAGG--
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGCCTTAGAAGGGG
GGGGCCCAAGGGGG--
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGGCCTTAGAAGGGG
CAGGCCNNGGCCNN--
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGGCCTTAGAAGGGG
CAAGACGCCTTA-------
 A C G T A C G T A C G T C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGGCCTTAGAAGGGG
----CCTTTGAWGT--
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GAGGCCTTAGAAGGGG
-TGACCTTGAN-----
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGGCCTTAGAAGGGG-
-TGACCATATATGGTCA
 C T A G C G T A A C T G A C T G A G T C A G T C A G C T A C G T C T G A A C T G C G T A C T G A A C T G C T A G C T A G A C T G A C G T
A C G T G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A