Information for 10-CCACAAAAAT (Motif 13)

A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
Reverse Opposite:
C T G A A C G T A G C T A G C T A G C T C G A T A T C G C A G T A C T G A C T G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif64.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets42.6 +/- 26.3bp
Average Position of motif in Background49.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAAAT
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAAAAT
AAACCACAGAN--
 A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAAAT
AAACCGCAAA---
 A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAAAT
AAACCACANN---
 A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAAAT--
AGAGCCATAAAATTCG
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAAAT
NAAACCACAG----
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAAAT---
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAAAAT
AAACCACAGC---
 A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACAAAAAT
ATCCAC------
 A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAAAT
AAGCCATAAAA--
 A C G T A C G T A C G T A G T C G T A C G T C A A T G C C G T A C T G A C T G A C T G A C G T A G A C T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T