Information for 9-VTTCTGAGAA (Motif 10)

T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A
Reverse Opposite:
C A G T A C G T A G T C C G A T G A T C C G T A A C T G G T C A C G T A A T C G
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.735
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif649.4
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets53.4 +/- 22.0bp
Average Position of motif in Background48.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-VTTCTGAGAA-
NTTTCTNAGAAA
 A C G T T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:VTTCTGAGAA--
-TTCTTGGAAAN
 T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:VTTCTGAGAA----
TTTCCAGGAAATGG
 T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:VTTCTGAGAA-
CTTCTGGGAAA
 T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:VTTCTGAGAA-
TTTCCAGGAAA
 T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-VTTCTGAGAA---
ATTTCCNGGAAATN
 A C G T T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T A C G T A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-VTTCTGAGAA-
NTTTCCNGGAAA
 A C G T T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--VTTCTGAGAA--
NNCTTCCNGGAAGN
 A C G T A C G T T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---VTTCTGAGAA---
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:VTTCTGAGAA
CTTCCNGGAA
 T A G C G C A T A C G T T G A C C G A T C T A G C G T A A C T G C G T A G T C A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A